BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H10LP1|AL430312
(466 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1303 905 0.0
>3x_Contig1303
Length = 8112
Score = 905 bits (455), Expect = 0.0
Identities = 464/467 (99%), Gaps = 1/467 (0%)
Strand = Plus / Minus
Query: 1 gatcaagaaatgtcaggctttgacggagt-tgagatgaaacagctatgcgagatgatgaa 59
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1377 gatcaagaaatgtcaggctttgacggagtctgagatgaaacagctatgcgagatgatgaa 1318
Query: 60 ggaactcttaatggaagaatcgaatattcagccggttcaatcgccggtgactgtttgtgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 ggaactcttaatggaagaatcgaatattcagccggttcaatcgccggtgactgtttgtgg 1258
Query: 120 tgatattcacggacaatttcatgaccttttagaactattcagaactgctggtgggtttcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 tgatattcacggacaatttcatgaccttttagaactattcagaactgctggtgggtttcc 1198
Query: 180 tgatcaagtaaactatatttttcttggtgactatgtagatcgtggttattacagtttgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 tgatcaagtaaactatatttttcttggtgactatgtagatcgtggttattacagtttgga 1138
Query: 240 gacgttcacacttcttatgtgtttgaaagtkaaatatccttccagaattactttggttag 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1137 gacgttcacacttcttatgtgtttgaaagtgaaatatccttccagaattactttggttag 1078
Query: 300 aggaaatcatgagtcgaggcaaattacacaagtttatgggttttatgaggaatgtttaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 aggaaatcatgagtcgaggcaaattacacaagtttatgggttttatgaggaatgtttaaa 1018
Query: 360 taagtatggttccacaacggtttggaagtattgttgtcaagtgtttkatttcttaacttt 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1017 taagtatggttccacaacggtttggaagtattgttgtcaagtgtttgatttcttaacttt 958
Query: 420 ggcagctattattgacgggaaaattttatgtgtgcatggtggtttgt 466
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 ggcagctattattgacgggaaaattttatgtgtgcatggtggtttgt 911
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3112
Number of Sequences: 1807
Number of extensions: 3112
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 466
length of database: 10,358,551
effective HSP length: 16
effective length of query: 450
effective length of database: 10,329,639
effective search space: 4648337550
effective search space used: 4648337550
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)